Danial Sabri Dashti

Danial Sabri Dashti

Amazon Inc. - Seattle / United States
Engineering & Technology / Computer Science
AD Scientific Index ID: 5614435
person_outline Danial Sabri Dashti's MOST POPULAR ARTICLES
1-) Computing alchemical free energy differences with Hamiltonian replica exchange molecular dynamics (H-REMD) simulationsY Meng, D Sabri Dashti, AE RoitbergJournal of chemical theory and computation 7 (9), 2721-2727, 20111042011
2-) pH-Replica Exchange Molecular Dynamics in Proteins Using a Discrete Protonation MethodD Sabri Dashti, Y Meng, AE RoitbergThe Journal of Physical Chemistry B, 2012492012
3-) Optimization of umbrella sampling replica exchange molecular dynamics by replica positioningD Sabri Dashti, AE RoitbergJournal of chemical theory and computation 9 (11), 4692-4699, 2013472013
4-) Pairwise additivity of energy components in protein-ligand binding: The HIV II protease-indinavir caseMN Ucisik, DS Dashti, JC Faver, KM MerzThe Journal of chemical physics 135 (8), 2011262011
5-) Prediction of trypsin/molecular fragment binding affinities by free energy decomposition and empirical scoresML Benson, JC Faver, MN Ucisik, DS Dashti, Z Zheng, KM MerzJournal of computer-aided molecular design 26, 647-659, 2012252012